所获荣誉
LitCoin⾃然语⾔处理挑战赛第⼀阶段第一名(主要贡献者)
LitCoin⾃然语⾔处理挑战赛第⼆阶段第二名(主要贡献者)
BioCreative VII DrugProt⼤规模赛道第二名(主要贡献者)
代表性论文
[1] Li, Z., Wei, Q., Huang, L. C., Li, J., Hu, Y., Chuang, Y. S., ... & Xu, H. (2024). Ensemble pretrained language models to extract biomedical knowledge from literature. Journal of the American Medical Informatics Association, 31(9), 1904-1911.
[2] Li, Z., Lan, L., Zhou, Y., Li, R., Chavin, K. D., Xu, H., ... & Zheng, W. J. (2024). Developing deep learning-based strategies to predict the risk of hepatocellular carcinoma among patients with nonalcoholic fatty liver disease from electronic health records. Journal of Biomedical Informatics, 152, 104626.
[3] Li, Z., Li, R., Zhou, Y., Rasmy, L., Zhi, D., Zhu, P., ... & Zheng, W. J. (2023). Prediction of Brain Metastases Development in Patients With Lung Cancer by Explainable Artificial Intelligence From Electronic Health Records. JCO clinical cancer informatics, 7, e2200141.
[4 Li, Z., Li, R., Kiser, K. J., Giancardo, L., & Zheng, W. J. (2021, August). Segmenting thoracic cavities with neoplastic lesions: a head-to-head benchmark with fully convolutional neural networks. In Proceedings of the 12th ACM International Conference on Bioinformatics, Computational Biology, and Health Informatics (pp. 1-8).
[5] Li, Z., Li, J., & Yu, P. (2018). GEOMetaCuration: a web-based application for accurate manual curation of Gene Expression Omnibus metadata. Database, 2018, bay019.
[6] Li, Z., Li, J., & Yu, P. (2017). l1kdeconv: an R package for peak calling analysis with LINCS L1000 data. BMC bioinformatics, 18, 1-7.
[7] Li, Z., Tang, J., & Guo, F. (2016). Learning from real imbalanced data of 14-3-3 proteins binding specificity. Neurocomputing, 217, 83-91.